machine learning

On the limits of graph neural networks for the early diagnosis of Alzheimer’s disease

Alzheimer's disease (AD) is a neurodegenerative disease whose molecular mechanisms are activated several years before cognitive symptoms appear. Genotype-based prediction of the phenotype is thus a key challenge for the early diagnosis of AD. Machine …

spongEffects

ceRNA modules offer patient-specific insights into miRNA regulation.

spongEffects: ceRNA modules offer patient-specific insights into the miRNA regulatory landscape

Cancer is one of the leading causes of death worldwide. Despite significant improvements in prevention and treatment, mortality remains high for many cancer types. Hence, innovative methods that use molecular data to stratify patients and identify …

The AIMe registry for artificial intelligence in biomedical research

We present the AIMe registry, a community driven reporting platform for AI in biomedicine. It aims to enhance the accessibility, reproducibility and usability of biomedical AI models, and allows future revisions by the community.

The FeatureCloud AI Store for Federated Learning in Biomedicine and Beyond

Machine Learning (ML) and Artificial Intelligence (AI) have shown promising results in many areas and are driven by the increasing amount of available data. However, this data is often distributed across different institutions and cannot be shared …

Machine learning for deciphering cell heterogeneity and gene regulation

Epigenetics studies inheritable and reversible modifications of DNA that allow cells to control gene expression throughout their development and in response to environmental conditions. In computational epigenomics, machine learning is applied to …

Arrhythmic Gut Microbiome Signatures Predict Risk of Type 2 Diabetes

Lifestyle, obesity, and the gut microbiome are important risk factors for metabolic disorders. We demonstrate in 1,976 subjects of a German population cohort (KORA) that specific microbiota members show 24-h oscillations in their relative abundance …