An ontology-based method for assessing batch effect adjustmentapproaches in heterogeneous datasets

International consortia such as the Genotype-Tissue Expression(GTEx) project, The Cancer Genome Atlas (TCGA) or theInternational Human Epigenetics Consortium (IHEC) have produceda wealth of genomic datasets with the goal of advancing ourunderstanding …

DeepBlueR: large-scale epigenomic analysis in R

DeepBlue epigenomic data server: programmatic data retrieval and analysis of epigenome region sets