Tim Kacprowski

Latest

• Systematic analysis of alternative splicing in time course data using Spycone
• Network-based approaches for modeling disease regulation and progression
• Inference of differential gene regulatory networks from gene expression data using boosted differential trees
• The Limits of Molecular Signatures for Pancreatic Ductal Adenocarcinoma Subtyping
• sPLINK: A Federated, Privacy-Preserving Tool as a Robust Alternative to Meta-Analysis in Genome-Wide Association Studies
• Alternative splicing analysis benchmark with DICAST
• Robust disease module mining via enumeration of diverse prize-collecting Steiner trees
• Functional enrichment of alternative splicing events with NEASE reveals insights into tissue identity and diseases
• The AIMe registry for artificial intelligence in biomedical research
• The FeatureCloud AI Store for Federated Learning in Biomedicine and Beyond
• Network analysis methods for studying microbial communities: A mini review
• ASimulatoR: splice-aware RNA-Seq data simulation
• BiCoN: Network-constrained biclustering of patients and omics data
• A framework for modeling epistatic interaction
• DIGGER: exploring the functional role of alternative splicing in protein interactions
• Exploring the SARS-CoV-2 virus-host-drug interactome for drug repurposing
• Multi-Omics Analysis in a Network Context (in "Reference Module in Biomedical Sciences")
• EpiGEN: an epistasis simulation pipeline