21 Apr 2020
The HiTSeekR web application is now hosted on ExBio. From now on you can find our github repository at biomedbigdata. We updated STITCH to version 5.0 and use the latest mirCancer data from October 2019. Additionally, downloading BioAssays from PubChem via AID is available again.
16 Jun 2016
An essential feature for the HTS community that is missing in HiTSeekR is the
management of samples and plates in the thousands or hundreds of thousands experiments
routinely performed in HTS facilities. However, HiTSeekR is intended for analysis and
does not keep track of uploaded data. To mitigate this, we have developed a HTS sample
management application called SAVANAH and integrated it with HiTSeekR. The mechanism
we implemented to realize this integration is still in beta status but can
in the future be used to integrate HiTSeekR with other HTS sample management solutions.
More information about SAVANAH is available at its project page.
A screencast tutorial explaining an exemplary analysis of a microRNA mimics screen in now available on YouTube